J3_6DNC_022
3D structure
- PDB id
- 6DNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 6DNC|1|B|U|2334, 6DNC|1|B|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6DNC|1|B|C|2295
6DNC|1|B|U|2296
6DNC|1|B|A|2297
6DNC|1|B|A|2298
6DNC|1|B|U|2299
*
6DNC|1|B|A|2317
6DNC|1|B|G|2318
6DNC|1|B|G|2319
6DNC|1|B|U|2320
6DNC|1|B|U|2321
6DNC|1|B|A|2322
6DNC|1|B|G|2323
*
6DNC|1|B|C|2332
6DNC|1|B|A|2333
6DNC|1|B|U|2334
6DNC|1|B|A|2335
6DNC|1|B|A|2336
6DNC|1|B|G|2337
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain AA
- 50S ribosomal protein L27
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain I
- 50S ribosomal protein L5
- Chain LA
- Transfer RNA; tRNA
- Chain S
- 50S ribosomal protein L18
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