J3_6ERI_005

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UGGACA*UAUG*CAAG

Length

14 nucleotides

Bulged bases

6ERI|1|AA|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|AA|U|856
6ERI|1|AA|G|857
6ERI|1|AA|G|858
6ERI|1|AA|A|859
6ERI|1|AA|C|860
6ERI|1|AA|A|861
*
6ERI|1|AA|U|935
6ERI|1|AA|A|936
6ERI|1|AA|U|937
6ERI|1|AA|G|938
*
6ERI|1|AA|C|958
6ERI|1|AA|A|959
6ERI|1|AA|A|960
6ERI|1|AA|G|961

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AW

50S ribosomal protein L27, chloroplastic