J3_6ERI_015

3D structure

PDB id

6ERI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUAGG*CG*UCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ERI|1|Ax|C|11
6ERI|1|Ax|C|12
6ERI|1|Ax|U|13
6ERI|1|Ax|A|14
6ERI|1|Ax|G|15
6ERI|1|Ax|G|16
*
6ERI|1|Ax|C|68
6ERI|1|Ax|G|69
*
6ERI|1|Ax|U|108
6ERI|1|Ax|C|109
6ERI|1|Ax|G|110

Current chains

Chain Ax

5S ribosomal RNA

Nearby chains

Chain AO

50S ribosomal protein L18, chloroplastic

Chain AW

50S ribosomal protein L27, chloroplastic