J3_6FEC_015
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- UGGA*UUAAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 6FEC|1|A|G|917
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FEC|1|A|U|672
6FEC|1|A|G|673
6FEC|1|A|G|674
6FEC|1|A|A|675
*
6FEC|1|A|U|913
6FEC|1|A|U|914
6FEC|1|A|A|915
6FEC|1|A|A|916
6FEC|1|A|G|917
6FEC|1|A|A|918
*
6FEC|1|A|U|1018
6FEC|1|A|A|1019
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein S11
- Chain Q
- 40S ribosomal protein S23
- Chain X
- 40S ribosomal protein S7
- Chain Y
- 40S ribosomal protein S27
- Chain Z
- 40S ribosomal protein S13
- Chain a
- 40S ribosomal protein S15a
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