J3_6FEC_017
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- GGCCCGGAC*GGGUG*UUAGAUGUC
- Length
- 23 nucleotides
- Bulged bases
- 6FEC|1|A|G|1270, 6FEC|1|A|G|1503
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FEC|1|A|G|1265
6FEC|1|A|G|1266
6FEC|1|A|C|1267
6FEC|1|A|C|1268
6FEC|1|A|C|1269
6FEC|1|A|G|1270
6FEC|1|A|G|1271
6FEC|1|A|A|1272
6FEC|1|A|C|1273
*
6FEC|1|A|G|1316
6FEC|1|A|G|1317
6FEC|1|A|G|1318
6FEC|1|A|U|1319
6FEC|1|A|G|1320
*
6FEC|1|A|U|1500
6FEC|1|A|U|1501
6FEC|1|A|A|1502
6FEC|1|A|G|1503
6FEC|1|A|A|1504
6FEC|1|A|U|1505
6FEC|1|A|G|1506
6FEC|1|A|U|1507
6FEC|1|A|C|1508
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain J
- 40S ribosomal protein S29
- Chain n
- 40S ribosomal protein S15
- Chain p
- Ubiquitin-40S ribosomal protein S27a
- Chain r
- 40S ribosomal protein S12
- Chain t
- 40S ribosomal protein S10
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