J3_6FEC_018
3D structure
- PDB id
- 6FEC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human cap-dependent 48S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 6FEC|1|A|U|1473
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FEC|1|A|C|1387
6FEC|1|A|U|1388
6FEC|1|A|G|1389
6FEC|1|A|G|1390
6FEC|1|A|C|1391
*
6FEC|1|A|G|1446
6FEC|1|A|G|1447
6FEC|1|A|A|1448
6FEC|1|A|C|1449
6FEC|1|A|A|1450
6FEC|1|A|A|1451
6FEC|1|A|G|1452
*
6FEC|1|A|C|1466
6FEC|1|A|C|1467
6FEC|1|A|C|1468
6FEC|1|A|G|1469
6FEC|1|A|A|1470
6FEC|1|A|G|1471
6FEC|1|A|A|1472
6FEC|1|A|U|1473
6FEC|1|A|U|1474
6FEC|1|A|G|1475
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 9
- EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D
- Chain H
- 40S ribosomal protein S16
- Chain J
- 40S ribosomal protein S29
- Chain U
- 40S ribosomal protein S5
- Chain e
- 40S ribosomal protein S17
- Chain g
- 40S ribosomal protein S3
- Chain h
- 40S ribosomal protein S20
- Chain m
- Receptor of activated protein C kinase 1
Coloring options: