J3_6FRK_005

3D structure

PDB id

6FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCGCAGUCC*GGUGC*GACGUC

Length

20 nucleotides

Bulged bases

6FRK|1|5|G|703

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FRK|1|5|G|448
6FRK|1|5|C|449
6FRK|1|5|G|450
6FRK|1|5|C|451
6FRK|1|5|A|452
6FRK|1|5|G|453
6FRK|1|5|U|454
6FRK|1|5|C|455
6FRK|1|5|C|456
*
6FRK|1|5|G|700
6FRK|1|5|G|701
6FRK|1|5|U|702
6FRK|1|5|G|703
6FRK|1|5|C|704
*
6FRK|1|5|G|1293
6FRK|1|5|A|1294
6FRK|1|5|C|1295
6FRK|1|5|G|1296
6FRK|1|5|U|1297
6FRK|1|5|C|1298

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 3

Ribosomal protein eL28

Chain E

Ribosomal protein eL6

Chain e

Ribosomal protein eL32

Chain f

Ribosomal protein eL33