J3_6FRK_006
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
- Length
- 33 nucleotides
- Bulged bases
- 6FRK|1|5|C|962, 6FRK|1|5|G|965, 6FRK|1|5|G|1281, 6FRK|1|5|G|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|5|A|711
6FRK|1|5|C|712
6FRK|1|5|C|713
*
6FRK|1|5|G|955
6FRK|1|5|A|956
6FRK|1|5|G|957
6FRK|1|5|G|958
6FRK|1|5|G|959
6FRK|1|5|A|960
6FRK|1|5|G|961
6FRK|1|5|C|962
6FRK|1|5|G|963
6FRK|1|5|A|964
6FRK|1|5|G|965
6FRK|1|5|A|966
6FRK|1|5|C|967
6FRK|1|5|C|968
6FRK|1|5|C|969
6FRK|1|5|G|970
6FRK|1|5|U|971
6FRK|1|5|C|972
6FRK|1|5|G|973
6FRK|1|5|C|974
6FRK|1|5|C|975
6FRK|1|5|G|976
*
6FRK|1|5|C|1278
6FRK|1|5|A|1279
6FRK|1|5|C|1280
6FRK|1|5|G|1281
6FRK|1|5|G|1282
6FRK|1|5|G|1283
6FRK|1|5|G|1284
6FRK|1|5|U|1285
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Ribosomal protein eL28
- Chain C
- Ribosomal protein uL4
- Chain E
- Ribosomal protein eL6
- Chain F
- Ribosomal protein uL30
- Chain e
- Ribosomal protein eL32
- Chain f
- Ribosomal protein eL33
Coloring options: