3D structure

PDB id
6FRK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GGAGAUG*CAGU*AGGGUGUAAAUCUC
Length
25 nucleotides
Bulged bases
6FRK|1|5|C|2768
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6FRK|1|5|G|2549
6FRK|1|5|G|2550
6FRK|1|5|A|2551
6FRK|1|5|G|2552
6FRK|1|5|A|2553
6FRK|1|5|U|2554
6FRK|1|5|G|2555
*
6FRK|1|5|C|2572
6FRK|1|5|A|2573
6FRK|1|5|G|2574
6FRK|1|5|U|2575
*
6FRK|1|5|A|2757
6FRK|1|5|G|2758
6FRK|1|5|G|2759
6FRK|1|5|G|2760
6FRK|1|5|U|2761
6FRK|1|5|G|2762
6FRK|1|5|U|2763
6FRK|1|5|A|2764
6FRK|1|5|A|2765
6FRK|1|5|A|2766
6FRK|1|5|U|2767
6FRK|1|5|C|2768
6FRK|1|5|U|2769
6FRK|1|5|C|2770

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain Z
60S ribosomal protein L27
Chain g
Ribosomal protein eL34

Coloring options:

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