J3_6FRK_020
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAU*GCUUCUGGG*CACAAGG
- Length
- 19 nucleotides
- Bulged bases
- 6FRK|1|5|C|4990, 6FRK|1|5|A|5061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|5|C|4970
6FRK|1|5|A|4971
6FRK|1|5|U|4972
*
6FRK|1|5|G|4986
6FRK|1|5|C|4987
6FRK|1|5|U|4988
6FRK|1|5|U|4989
6FRK|1|5|C|4990
6FRK|1|5|U|4991
6FRK|1|5|G|4992
6FRK|1|5|G|4993
6FRK|1|5|G|4994
*
6FRK|1|5|C|5057
6FRK|1|5|A|5058
6FRK|1|5|C|5059
6FRK|1|5|A|5060
6FRK|1|5|A|5061
6FRK|1|5|G|5062
6FRK|1|5|G|5063
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Signal recognition particle RNA; SRP RNA
- Chain B
- Ribosomal protein uL3
- Chain P
- Ribosomal protein uL22
- Chain d
- Ribosomal protein eL31
- Chain r
- Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72
- Chain x
- Signal recognition particle 54 kDa protein
Coloring options: