J3_6FRK_032
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCGGUUG*CCUUCGUCCU*GUCACGCACGCCGUUCGUGG
- Length
- 37 nucleotides
- Bulged bases
- 6FRK|1|5|C|4883, 6FRK|1|5|C|4937, 6FRK|1|5|C|4939, 6FRK|1|5|G|4951
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FRK|1|5|U|4748
6FRK|1|5|C|4749
6FRK|1|5|G|4750
6FRK|1|5|G|4751
6FRK|1|5|U|4752
6FRK|1|5|U|4753
6FRK|1|5|G|4754
*
6FRK|1|5|C|4879
6FRK|1|5|C|4880
6FRK|1|5|U|4881
6FRK|1|5|U|4882
6FRK|1|5|C|4883
6FRK|1|5|G|4884
6FRK|1|5|U|4885
6FRK|1|5|C|4886
6FRK|1|5|C|4887
6FRK|1|5|U|4888
*
6FRK|1|5|G|4931
6FRK|1|5|U|4932
6FRK|1|5|C|4933
6FRK|1|5|A|4934
6FRK|1|5|C|4935
6FRK|1|5|G|4936
6FRK|1|5|C|4937
6FRK|1|5|A|4938
6FRK|1|5|C|4939
6FRK|1|5|G|4941
6FRK|1|5|C|4942
6FRK|1|5|C|4944
6FRK|1|5|G|4945
6FRK|1|5|U|4946
6FRK|1|5|U|4947
6FRK|1|5|C|4948
6FRK|1|5|G|4949
6FRK|1|5|U|4950
6FRK|1|5|G|4951
6FRK|1|5|G|4952
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein eL6
- Chain M
- Ribosomal protein eL14
- Chain O
- Ribosomal protein uL13
- Chain f
- Ribosomal protein eL33
Coloring options: