J3_6FTG_004
3D structure
- PDB id
- 6FTG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
- Length
- 33 nucleotides
- Bulged bases
- 6FTG|1|u|A|960, 6FTG|1|u|C|962, 6FTG|1|u|G|965, 6FTG|1|u|G|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FTG|1|u|A|711
6FTG|1|u|C|712
6FTG|1|u|C|713
*
6FTG|1|u|G|955
6FTG|1|u|A|956
6FTG|1|u|G|957
6FTG|1|u|G|958
6FTG|1|u|G|959
6FTG|1|u|A|960
6FTG|1|u|G|961
6FTG|1|u|C|962
6FTG|1|u|G|963
6FTG|1|u|A|964
6FTG|1|u|G|965
6FTG|1|u|A|966
6FTG|1|u|C|967
6FTG|1|u|C|968
6FTG|1|u|C|969
6FTG|1|u|G|970
6FTG|1|u|U|971
6FTG|1|u|C|972
6FTG|1|u|G|973
6FTG|1|u|C|974
6FTG|1|u|C|975
6FTG|1|u|G|976
*
6FTG|1|u|C|1278
6FTG|1|u|A|1279
6FTG|1|u|C|1280
6FTG|1|u|G|1281
6FTG|1|u|G|1282
6FTG|1|u|G|1283
6FTG|1|u|G|1284
6FTG|1|u|U|1285
Current chains
- Chain u
- 28S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein L4
- Chain E
- 60S ribosomal protein L6
- Chain F
- uL30
- Chain e
- eL32
- Chain f
- eL33
- Chain r
- eL28
Coloring options: