3D structure

PDB id
6FTG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Experimental method
ELECTRON MICROSCOPY
Resolution
9.1 Å

Loop

Sequence
ACC*GAGGGAGCGAGACCCGUCGCCG*CACGGGGU
Length
33 nucleotides
Bulged bases
6FTG|1|u|A|960, 6FTG|1|u|C|962, 6FTG|1|u|G|965, 6FTG|1|u|G|1281
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6FTG|1|u|A|711
6FTG|1|u|C|712
6FTG|1|u|C|713
*
6FTG|1|u|G|955
6FTG|1|u|A|956
6FTG|1|u|G|957
6FTG|1|u|G|958
6FTG|1|u|G|959
6FTG|1|u|A|960
6FTG|1|u|G|961
6FTG|1|u|C|962
6FTG|1|u|G|963
6FTG|1|u|A|964
6FTG|1|u|G|965
6FTG|1|u|A|966
6FTG|1|u|C|967
6FTG|1|u|C|968
6FTG|1|u|C|969
6FTG|1|u|G|970
6FTG|1|u|U|971
6FTG|1|u|C|972
6FTG|1|u|G|973
6FTG|1|u|C|974
6FTG|1|u|C|975
6FTG|1|u|G|976
*
6FTG|1|u|C|1278
6FTG|1|u|A|1279
6FTG|1|u|C|1280
6FTG|1|u|G|1281
6FTG|1|u|G|1282
6FTG|1|u|G|1283
6FTG|1|u|G|1284
6FTG|1|u|U|1285

Current chains

Chain u
28S ribosomal RNA

Nearby chains

Chain C
Ribosomal protein L4
Chain E
60S ribosomal protein L6
Chain F
uL30
Chain e
eL32
Chain f
eL33
Chain r
eL28

Coloring options:

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