J3_6FTG_024

3D structure

PDB id

6FTG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes

Experimental method

ELECTRON MICROSCOPY

Resolution

9.1 Å

Loop

Sequence

GGAGAUG*CAGU*AGGGUGUAAAUCUC

Length

25 nucleotides

Bulged bases

6FTG|1|u|C|2768

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTG|1|u|G|2549
6FTG|1|u|G|2550
6FTG|1|u|A|2551
6FTG|1|u|G|2552
6FTG|1|u|A|2553
6FTG|1|u|U|2554
6FTG|1|u|G|2555
*
6FTG|1|u|C|2572
6FTG|1|u|A|2573
6FTG|1|u|G|2574
6FTG|1|u|U|2575
*
6FTG|1|u|A|2757
6FTG|1|u|G|2758
6FTG|1|u|G|2759
6FTG|1|u|G|2760
6FTG|1|u|U|2761
6FTG|1|u|G|2762
6FTG|1|u|U|2763
6FTG|1|u|A|2764
6FTG|1|u|A|2765
6FTG|1|u|A|2766
6FTG|1|u|U|2767
6FTG|1|u|C|2768
6FTG|1|u|U|2769
6FTG|1|u|C|2770

Current chains

Chain u

28S ribosomal RNA

Nearby chains

Chain Z

60S ribosomal protein L27

Chain g

eL34