J3_6FTI_001

3D structure

PDB id

6FTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

6FTI|1|u|C|159

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FTI|1|u|C|112
6FTI|1|u|A|113
6FTI|1|u|G|114
6FTI|1|u|C|115
6FTI|1|u|G|116
*
6FTI|1|u|C|155
6FTI|1|u|G|156
6FTI|1|u|U|157
6FTI|1|u|A|158
6FTI|1|u|C|159
6FTI|1|u|G|160
*
6FTI|1|u|C|275
6FTI|1|u|C|276
6FTI|1|u|G|277
6FTI|1|u|G|278

Current chains

Chain u

28S rRNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36