J3_6FXC_018

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Aa|C|945
6FXC|1|Aa|A|946
6FXC|1|Aa|A|947
6FXC|1|Aa|G|948
*
6FXC|1|Aa|C|1354
6FXC|1|Aa|U|1355
6FXC|1|Aa|A|1356
6FXC|1|Aa|G|1357
6FXC|1|Aa|U|1358
6FXC|1|Aa|A|1359
6FXC|1|Aa|A|1360
*
6FXC|1|Aa|U|1382
6FXC|1|Aa|G|1383
6FXC|1|Aa|A|1384
6FXC|1|Aa|A|1385
6FXC|1|Aa|U|1386
6FXC|1|Aa|A|1387
6FXC|1|Aa|C|1388
6FXC|1|Aa|G|1389

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ag

30S ribosomal protein S7

Chain Ai

30S ribosomal protein S9