J3_6FXC_073

3D structure

PDB id

6FXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

6.76 Å

Loop

Sequence

UUGACAAC*GCCUUCC*GGACAA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6FXC|1|Aa|U|1010
6FXC|1|Aa|U|1011
6FXC|1|Aa|G|1012
6FXC|1|Aa|A|1013
6FXC|1|Aa|C|1014
6FXC|1|Aa|A|1015
6FXC|1|Aa|A|1016
6FXC|1|Aa|C|1017
*
6FXC|1|Aa|G|1030
6FXC|1|Aa|C|1031
6FXC|1|Aa|C|1032
6FXC|1|Aa|U|1033
6FXC|1|Aa|U|1034
6FXC|1|Aa|C|1035
6FXC|1|Aa|C|1036
*
6FXC|1|Aa|G|1045
6FXC|1|Aa|G|1046
6FXC|1|Aa|A|1047
6FXC|1|Aa|C|1048
6FXC|1|Aa|A|1049
6FXC|1|Aa|A|1050

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ac

30S ribosomal protein S3