J3_6GC0_023

3D structure

PDB id

6GC0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit assembly intermediate state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GC0|1|A|G|1055
6GC0|1|A|G|1056
6GC0|1|A|A|1057
6GC0|1|A|U|1058
*
6GC0|1|A|A|1080
6GC0|1|A|U|1081
6GC0|1|A|U|1082
6GC0|1|A|U|1083
6GC0|1|A|A|1084
6GC0|1|A|A|1085
6GC0|1|A|A|1086
6GC0|1|A|G|1087
*
6GC0|1|A|C|1102
6GC0|1|A|A|1103
6GC0|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains