J3_6GXM_007

3D structure

PDB id

6GXM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UCGACC*GAAAC*GUA

Length

14 nucleotides

Bulged bases

6GXM|1|A|A|1383, 6GXM|1|A|A|1384

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GXM|1|A|U|1344
6GXM|1|A|C|1345
6GXM|1|A|G|1346
6GXM|1|A|A|1347
6GXM|1|A|C|1348
6GXM|1|A|C|1349
*
6GXM|1|A|G|1382
6GXM|1|A|A|1383
6GXM|1|A|A|1384
6GXM|1|A|A|1385
6GXM|1|A|C|1386
*
6GXM|1|A|G|1401
6GXM|1|A|U|1402
6GXM|1|A|A|1403

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23