J3_6GZ3_023
3D structure
- PDB id
- 6GZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 6GZ3|1|B1|C|1138, 6GZ3|1|B1|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ3|1|B1|C|1094
6GZ3|1|B1|C|1095
6GZ3|1|B1|G|1096
*
6GZ3|1|B1|U|1136
6GZ3|1|B1|U|1137
6GZ3|1|B1|C|1138
6GZ3|1|B1|C|1139
6GZ3|1|B1|G|1140
*
6GZ3|1|B1|C|1147
6GZ3|1|B1|A|1148
6GZ3|1|B1|A|1149
6GZ3|1|B1|A|1150
6GZ3|1|B1|G|1151
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BA
- ribosomal protein uS2
- Chain BC
- ribosomal protein uS5
- Chain BN
- ribosomal protein uS15
- Chain BV
- ribosomal protein eS21
- Chain BW
- Ribosomal protein S15a
- Chain Ba
- ribosomal protein eS26
- Chain Bb
- ribosomal protein eS27
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