J3_6GZX_010

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCGUAAG*CGGGUG*CACUCAGG

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|1345
6GZX|1|A2|C|1346
6GZX|1|A2|G|1347
6GZX|1|A2|U|1348
6GZX|1|A2|A|1349
6GZX|1|A2|A|1350
6GZX|1|A2|G|1351
*
6GZX|1|A2|C|1673
6GZX|1|A2|G|1674
6GZX|1|A2|G|1675
6GZX|1|A2|G|1676
6GZX|1|A2|U|1677
6GZX|1|A2|G|1678
*
6GZX|1|A2|C|1685
6GZX|1|A2|A|1686
6GZX|1|A2|C|1687
6GZX|1|A2|U|1688
6GZX|1|A2|C|1689
6GZX|1|A2|A|1690
6GZX|1|A2|G|1691
6GZX|1|A2|G|1692

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain M2

50S ribosomal protein L17