J3_6GZX_018

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGGC*GCUAG*CG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|569
6GZX|1|A4|G|570
6GZX|1|A4|G|571
6GZX|1|A4|C|572
*
6GZX|1|A4|G|633
6GZX|1|A4|C|634
6GZX|1|A4|U|635
6GZX|1|A4|A|636
6GZX|1|A4|G|637
*
6GZX|1|A4|C|737
6GZX|1|A4|G|738

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain H4

30S ribosomal protein S8

Chain L4

30S ribosomal protein S12

Chain O4

30S ribosomal protein S15

Chain Q4

30S ribosomal protein S17