J3_6GZX_024
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CGAGCUUAAGCCGUUGAGGCGGAGGCGUAGG*CGAGUC*GGCGCAAACGGCCCGCACGCGGGCCGAAAAG
- Length
- 68 nucleotides
- Bulged bases
- 6GZX|1|A1|A|628, 6GZX|1|A1|U|640, 6GZX|1|A1|G|641, 6GZX|1|A1|A|642, 6GZX|1|A1|C|683, 6GZX|1|A1|G|684, 6GZX|1|A1|C|687, 6GZX|1|A1|G|689, 6GZX|1|A1|A|701
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|C|626
6GZX|1|A1|G|627
6GZX|1|A1|A|628
6GZX|1|A1|G|629
6GZX|1|A1|C|630
6GZX|1|A1|U|631
6GZX|1|A1|U|632
6GZX|1|A1|A|633
6GZX|1|A1|A|634
6GZX|1|A1|G|635
6GZX|1|A1|C|636
6GZX|1|A1|C|637
6GZX|1|A1|G|638
6GZX|1|A1|U|639
6GZX|1|A1|U|640
6GZX|1|A1|G|641
6GZX|1|A1|A|642
6GZX|1|A1|G|643
6GZX|1|A1|G|644
6GZX|1|A1|C|645
6GZX|1|A1|G|646
6GZX|1|A1|G|647
6GZX|1|A1|A|648
6GZX|1|A1|G|649
6GZX|1|A1|G|650
6GZX|1|A1|C|651
6GZX|1|A1|G|652
6GZX|1|A1|U|653
6GZX|1|A1|A|654
6GZX|1|A1|G|655
6GZX|1|A1|G|656
*
6GZX|1|A1|C|662
6GZX|1|A1|G|663
6GZX|1|A1|A|664
6GZX|1|A1|G|665
6GZX|1|A1|U|666
6GZX|1|A1|C|667
*
6GZX|1|A1|G|675
6GZX|1|A1|G|676
6GZX|1|A1|C|677
6GZX|1|A1|G|678
6GZX|1|A1|C|679
6GZX|1|A1|A|680
6GZX|1|A1|A|681
6GZX|1|A1|A|682
6GZX|1|A1|C|683
6GZX|1|A1|G|684
6GZX|1|A1|G|685
6GZX|1|A1|C|686
6GZX|1|A1|C|687
6GZX|1|A1|C|688
6GZX|1|A1|G|689
6GZX|1|A1|C|690
6GZX|1|A1|A|691
6GZX|1|A1|C|692
6GZX|1|A1|G|693
6GZX|1|A1|C|694
6GZX|1|A1|G|695
6GZX|1|A1|G|696
6GZX|1|A1|G|697
6GZX|1|A1|C|698
6GZX|1|A1|C|699
6GZX|1|A1|G|700
6GZX|1|A1|A|701
6GZX|1|A1|A|702
6GZX|1|A1|A|703
6GZX|1|A1|A|704
6GZX|1|A1|G|705
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain E1
- 50S ribosomal protein L4
- Chain K1
- 50S ribosomal protein L15
- Chain d1
- 50S ribosomal protein L35
Coloring options: