J3_6GZX_027
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CUGGCGACUG*CACAGCUCUCUGCGAACUCGUAAGAGGAGGUAUAGGGAGCGACG*CGUAACGACCGG
- Length
- 66 nucleotides
- Bulged bases
- 6GZX|1|A1|G|1834, 6GZX|1|A1|U|1841, 6GZX|1|A1|G|1849, 6GZX|1|A1|U|1853, 6GZX|1|A1|A|2005
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A1|C|1800
6GZX|1|A1|U|1801
6GZX|1|A1|G|1802
6GZX|1|A1|G|1803
6GZX|1|A1|C|1804
6GZX|1|A1|G|1805
6GZX|1|A1|A|1806
6GZX|1|A1|C|1807
6GZX|1|A1|U|1808
6GZX|1|A1|G|1809
*
6GZX|1|A1|C|1821
6GZX|1|A1|A|1822
6GZX|1|A1|C|1823
6GZX|1|A1|A|1824
6GZX|1|A1|G|1825
6GZX|1|A1|C|1826
6GZX|1|A1|U|1827
6GZX|1|A1|C|1828
6GZX|1|A1|U|1829
6GZX|1|A1|C|1830
6GZX|1|A1|U|1831
6GZX|1|A1|G|1832
6GZX|1|A1|C|1833
6GZX|1|A1|G|1834
6GZX|1|A1|A|1835
6GZX|1|A1|A|1836
6GZX|1|A1|C|1837
6GZX|1|A1|U|1838
6GZX|1|A1|C|1839
6GZX|1|A1|G|1840
6GZX|1|A1|U|1841
6GZX|1|A1|A|1842
6GZX|1|A1|A|1843
6GZX|1|A1|G|1844
6GZX|1|A1|A|1845
6GZX|1|A1|G|1846
6GZX|1|A1|G|1847
6GZX|1|A1|A|1848
6GZX|1|A1|G|1849
6GZX|1|A1|G|1850
6GZX|1|A1|U|1851
6GZX|1|A1|A|1852
6GZX|1|A1|U|1853
6GZX|1|A1|A|1854
6GZX|1|A1|G|1855
6GZX|1|A1|G|1856
6GZX|1|A1|G|1857
6GZX|1|A1|A|1858
6GZX|1|A1|G|1859
6GZX|1|A1|C|1860
6GZX|1|A1|G|1861
6GZX|1|A1|A|1862
6GZX|1|A1|C|1863
6GZX|1|A1|G|1864
*
6GZX|1|A1|C|1998
6GZX|1|A1|G|1999
6GZX|1|A1|U|2000
6GZX|1|A1|A|2001
6GZX|1|A1|A|2002
6GZX|1|A1|C|2003
6GZX|1|A1|G|2004
6GZX|1|A1|A|2005
6GZX|1|A1|C|2006
6GZX|1|A1|C|2007
6GZX|1|A1|G|2008
6GZX|1|A1|G|2009
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain A3
- Small subunit ribosomal RNA; SSU rRNA
- Chain C1
- 50S ribosomal protein L2
- Chain W1
- 50S ribosomal protein L28
Coloring options: