J3_6GZX_056
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CAAUGCCCACUACAAAG*CAAAAAGGUGGGCCCAGUUCGGAUUGG*CCAUGAAGCCG
- Length
- 55 nucleotides
- Bulged bases
- 6GZX|1|A4|U|1221, 6GZX|1|A4|A|1231, 6GZX|1|A4|C|1279, 6GZX|1|A4|C|1284, 6GZX|1|A4|U|1288, 6GZX|1|A4|U|1289
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A4|C|1218
6GZX|1|A4|A|1219
6GZX|1|A4|A|1220
6GZX|1|A4|U|1221
6GZX|1|A4|G|1222
6GZX|1|A4|C|1223
6GZX|1|A4|C|1224
6GZX|1|A4|C|1225
6GZX|1|A4|A|1226
6GZX|1|A4|C|1227
6GZX|1|A4|U|1228
6GZX|1|A4|A|1229
6GZX|1|A4|C|1230
6GZX|1|A4|A|1231
6GZX|1|A4|A|1232
6GZX|1|A4|A|1233
6GZX|1|A4|G|1234
*
6GZX|1|A4|C|1265
6GZX|1|A4|A|1266
6GZX|1|A4|A|1267
6GZX|1|A4|A|1268
6GZX|1|A4|A|1269
6GZX|1|A4|A|1270
6GZX|1|A4|G|1271
6GZX|1|A4|G|1272
6GZX|1|A4|U|1273
6GZX|1|A4|G|1274
6GZX|1|A4|G|1275
6GZX|1|A4|G|1276
6GZX|1|A4|C|1277
6GZX|1|A4|C|1278
6GZX|1|A4|C|1279
6GZX|1|A4|A|1280
6GZX|1|A4|G|1281
6GZX|1|A4|U|1282
6GZX|1|A4|U|1283
6GZX|1|A4|C|1284
6GZX|1|A4|G|1285
6GZX|1|A4|G|1286
6GZX|1|A4|A|1287
6GZX|1|A4|U|1288
6GZX|1|A4|U|1289
6GZX|1|A4|G|1290
6GZX|1|A4|G|1291
*
6GZX|1|A4|C|1308
6GZX|1|A4|C|1309
6GZX|1|A4|A|1310
6GZX|1|A4|U|1311
6GZX|1|A4|G|1312
6GZX|1|A4|A|1313
6GZX|1|A4|A|1314
6GZX|1|A4|G|1315
6GZX|1|A4|C|1316
6GZX|1|A4|C|1317
6GZX|1|A4|G|1318
Current chains
- Chain A4
- 16S ribosomal RNA
Nearby chains
- Chain G4
- 30S ribosomal protein S7
- Chain I4
- 30S ribosomal protein S9
- Chain J4
- 30S ribosomal protein S10
- Chain M4
- 30S ribosomal protein S13
- Chain N4
- 30S ribosomal protein S14 type Z
- Chain S4
- 30S ribosomal protein S19
- Chain U4
- 30S ribosomal protein Thx
- Chain Z2
- 50S ribosomal protein L31
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