J3_6GZX_058
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CCAUAGCGGCGUGGAACCACCCGUUCCC*GAACACGGAAGUGAAACGCGCCAGCG*UCG
- Length
- 57 nucleotides
- Bulged bases
- 6GZX|1|B2|C|14, 6GZX|1|B2|A|15, 6GZX|1|B2|U|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|B2|C|13
6GZX|1|B2|C|14
6GZX|1|B2|A|15
6GZX|1|B2|U|16
6GZX|1|B2|A|17
6GZX|1|B2|G|18
6GZX|1|B2|C|19
6GZX|1|B2|G|20
6GZX|1|B2|G|21
6GZX|1|B2|C|22
6GZX|1|B2|G|23
6GZX|1|B2|U|24
6GZX|1|B2|G|25
6GZX|1|B2|G|26
6GZX|1|B2|A|27
6GZX|1|B2|A|28
6GZX|1|B2|C|29
6GZX|1|B2|C|30
6GZX|1|B2|A|31
6GZX|1|B2|C|32
6GZX|1|B2|C|33
6GZX|1|B2|C|34
6GZX|1|B2|G|35
6GZX|1|B2|U|36
6GZX|1|B2|U|37
6GZX|1|B2|C|38
6GZX|1|B2|C|39
6GZX|1|B2|C|40
*
6GZX|1|B2|G|46
6GZX|1|B2|A|47
6GZX|1|B2|A|48
6GZX|1|B2|C|49
6GZX|1|B2|A|50
6GZX|1|B2|C|51
6GZX|1|B2|G|52
6GZX|1|B2|G|53
6GZX|1|B2|A|54
6GZX|1|B2|A|55
6GZX|1|B2|G|56
6GZX|1|B2|U|57
6GZX|1|B2|G|58
6GZX|1|B2|A|59
6GZX|1|B2|A|60
6GZX|1|B2|A|61
6GZX|1|B2|C|62
6GZX|1|B2|G|63
6GZX|1|B2|C|64
6GZX|1|B2|G|65
6GZX|1|B2|C|66
6GZX|1|B2|C|67
6GZX|1|B2|A|68
6GZX|1|B2|G|69
6GZX|1|B2|C|70
6GZX|1|B2|G|71
*
6GZX|1|B2|U|110
6GZX|1|B2|C|111
6GZX|1|B2|G|112
Current chains
- Chain B2
- 5S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain F2
- 50S ribosomal protein L5
- Chain N2
- 50S ribosomal protein L18
- Chain U2
- 50S ribosomal protein L25
- Chain V2
- 50S ribosomal protein L27
- Chain Z2
- 50S ribosomal protein L31
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