J3_6GZX_069

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGGGGACGC*GCC*GAAAAGCCU

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|1470
6GZX|1|A2|G|1471
6GZX|1|A2|G|1472
6GZX|1|A2|G|1473
6GZX|1|A2|G|1474
6GZX|1|A2|A|1475
6GZX|1|A2|C|1476
6GZX|1|A2|G|1477
6GZX|1|A2|C|1478
*
6GZX|1|A2|G|1612
6GZX|1|A2|C|1613
6GZX|1|A2|C|1614
*
6GZX|1|A2|G|1617
6GZX|1|A2|A|1618
6GZX|1|A2|A|1619
6GZX|1|A2|A|1620
6GZX|1|A2|A|1621
6GZX|1|A2|G|1622
6GZX|1|A2|C|1623
6GZX|1|A2|C|1624
6GZX|1|A2|U|1625

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain C2

50S ribosomal protein L2