J3_6GZX_077
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- CGGC*GCUAGACGGUGGGAGAGGGUGGUGGAAU*GGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACG
- Length
- 75 nucleotides
- Bulged bases
- 6GZX|1|A4|U|706, 6GZX|1|A4|C|727, 6GZX|1|A4|C|731, 6GZX|1|A4|C|732
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZX|1|A4|C|569
6GZX|1|A4|G|570
6GZX|1|A4|G|571
6GZX|1|A4|C|572
*
6GZX|1|A4|G|633
6GZX|1|A4|C|634
6GZX|1|A4|U|635
6GZX|1|A4|A|636
6GZX|1|A4|G|637
6GZX|1|A4|A|638
6GZX|1|A4|C|639
6GZX|1|A4|G|640
6GZX|1|A4|G|641
6GZX|1|A4|U|642
6GZX|1|A4|G|643
6GZX|1|A4|G|644
6GZX|1|A4|G|645
6GZX|1|A4|A|646
6GZX|1|A4|G|647
6GZX|1|A4|A|648
6GZX|1|A4|G|649
6GZX|1|A4|G|650
6GZX|1|A4|G|651
6GZX|1|A4|U|652
6GZX|1|A4|G|653
6GZX|1|A4|G|654
6GZX|1|A4|U|655
6GZX|1|A4|G|656
6GZX|1|A4|G|657
6GZX|1|A4|A|658
6GZX|1|A4|A|659
6GZX|1|A4|U|660
*
6GZX|1|A4|G|696
6GZX|1|A4|G|697
6GZX|1|A4|A|698
6GZX|1|A4|A|699
6GZX|1|A4|C|700
6GZX|1|A4|G|701
6GZX|1|A4|C|702
6GZX|1|A4|C|703
6GZX|1|A4|G|704
6GZX|1|A4|A|705
6GZX|1|A4|U|706
6GZX|1|A4|G|707
6GZX|1|A4|G|708
6GZX|1|A4|C|709
6GZX|1|A4|G|710
6GZX|1|A4|A|711
6GZX|1|A4|A|712
6GZX|1|A4|G|713
6GZX|1|A4|G|714
6GZX|1|A4|C|715
6GZX|1|A4|A|716
6GZX|1|A4|G|717
6GZX|1|A4|C|718
6GZX|1|A4|C|719
6GZX|1|A4|A|720
6GZX|1|A4|C|721
6GZX|1|A4|C|722
6GZX|1|A4|U|723
6GZX|1|A4|G|724
6GZX|1|A4|G|725
6GZX|1|A4|U|726
6GZX|1|A4|C|727
6GZX|1|A4|C|728
6GZX|1|A4|A|729
6GZX|1|A4|C|730
6GZX|1|A4|C|731
6GZX|1|A4|C|732
6GZX|1|A4|G|733
6GZX|1|A4|U|734
6GZX|1|A4|G|735
6GZX|1|A4|A|736
6GZX|1|A4|C|737
6GZX|1|A4|G|738
Current chains
- Chain A4
- 16S ribosomal RNA
Nearby chains
- Chain C2
- 50S ribosomal protein L2
- Chain F4
- 30S ribosomal protein S6
- Chain H4
- 30S ribosomal protein S8
- Chain K4
- 30S ribosomal protein S11
- Chain L4
- 30S ribosomal protein S12
- Chain O4
- 30S ribosomal protein S15
- Chain Q4
- 30S ribosomal protein S17
- Chain R4
- 30S ribosomal protein S18
- Chain V4
- Ribosome hibernation promoting factor
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