J3_6GZZ_010
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGAGCUAGC*GCUAGGAG*CUAACCGAG
- Length
- 26 nucleotides
- Bulged bases
- 6GZZ|1|A2|G|735, 6GZZ|1|A2|A|838, 6GZZ|1|A2|C|839, 6GZZ|1|A2|G|841
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A2|C|732
6GZZ|1|A2|G|733
6GZZ|1|A2|A|734
6GZZ|1|A2|G|735
6GZZ|1|A2|C|736
6GZZ|1|A2|U|737
6GZZ|1|A2|A|738
6GZZ|1|A2|G|739
6GZZ|1|A2|C|740
*
6GZZ|1|A2|G|820
6GZZ|1|A2|C|821
6GZZ|1|A2|U|822
6GZZ|1|A2|A|823
6GZZ|1|A2|G|824
6GZZ|1|A2|G|825
6GZZ|1|A2|A|826
6GZZ|1|A2|G|827
*
6GZZ|1|A2|C|835
6GZZ|1|A2|U|836
6GZZ|1|A2|A|837
6GZZ|1|A2|A|838
6GZZ|1|A2|C|839
6GZZ|1|A2|C|840
6GZZ|1|A2|G|841
6GZZ|1|A2|A|842
6GZZ|1|A2|G|843
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain C2
- 50S ribosomal protein L2
- Chain E2
- 50S ribosomal protein L4
- Chain R2
- 50S ribosomal protein L22
- Chain c2
- 50S ribosomal protein L34
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