J3_6GZZ_018

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GCCUAAGA*UUAGGAAUCUUCCG*CGGAGC

Length

28 nucleotides

Bulged bases

6GZZ|1|A3|A|51, 6GZZ|1|A3|U|363

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|G|46
6GZZ|1|A3|C|47
6GZZ|1|A3|C|48
6GZZ|1|A3|U|49
6GZZ|1|A3|A|50
6GZZ|1|A3|A|51
6GZZ|1|A3|G|52
6GZZ|1|A3|A|53
*
6GZZ|1|A3|U|353
6GZZ|1|A3|U|354
6GZZ|1|A3|A|355
6GZZ|1|A3|G|356
6GZZ|1|A3|G|357
6GZZ|1|A3|A|358
6GZZ|1|A3|A|359
6GZZ|1|A3|U|360
6GZZ|1|A3|C|361
6GZZ|1|A3|U|362
6GZZ|1|A3|U|363
6GZZ|1|A3|C|364
6GZZ|1|A3|C|365
6GZZ|1|A3|G|366
*
6GZZ|1|A3|C|385
6GZZ|1|A3|G|386
6GZZ|1|A3|G|387
6GZZ|1|A3|A|388
6GZZ|1|A3|G|389
6GZZ|1|A3|C|390

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain L3

30S ribosomal protein S12

Chain P3

30S ribosomal protein S16