J3_6GZZ_029
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CCUCGGCA*UGACCGAUAGCGCACCAGUAC*GGAAAGG
- Length
- 36 nucleotides
- Bulged bases
- 6GZZ|1|A1|C|34, 6GZZ|1|A1|A|471, 6GZZ|1|A1|U|476, 6GZZ|1|A1|C|479, 6GZZ|1|A1|C|484
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A1|C|31
6GZZ|1|A1|C|32
6GZZ|1|A1|U|33
6GZZ|1|A1|C|34
6GZZ|1|A1|G|35
6GZZ|1|A1|G|36
6GZZ|1|A1|C|37
6GZZ|1|A1|A|38
*
6GZZ|1|A1|U|469
6GZZ|1|A1|G|470
6GZZ|1|A1|A|471
6GZZ|1|A1|C|472
6GZZ|1|A1|C|473
6GZZ|1|A1|G|474
6GZZ|1|A1|A|475
6GZZ|1|A1|U|476
6GZZ|1|A1|A|477
6GZZ|1|A1|G|478
6GZZ|1|A1|C|479
6GZZ|1|A1|G|480
6GZZ|1|A1|C|481
6GZZ|1|A1|A|482
6GZZ|1|A1|C|483
6GZZ|1|A1|C|484
6GZZ|1|A1|A|485
6GZZ|1|A1|G|486
6GZZ|1|A1|U|487
6GZZ|1|A1|A|488
6GZZ|1|A1|C|489
*
6GZZ|1|A1|G|496
6GZZ|1|A1|G|497
6GZZ|1|A1|A|498
6GZZ|1|A1|A|499
6GZZ|1|A1|A|500
6GZZ|1|A1|G|501
6GZZ|1|A1|G|502
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain E1
- 50S ribosomal protein L4
- Chain K1
- 50S ribosomal protein L15
- Chain P1
- 50S ribosomal protein L20
- Chain S1
- 50S ribosomal protein L23
- Chain c1
- 50S ribosomal protein L34
Coloring options: