J3_6GZZ_032

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CAGGGUGAAG*UGGAGGCCCGAACC*GGAUG

Length

29 nucleotides

Bulged bases

6GZZ|1|A1|G|778

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|747
6GZZ|1|A1|A|748
6GZZ|1|A1|G|749
6GZZ|1|A1|G|750
6GZZ|1|A1|G|751
6GZZ|1|A1|U|752
6GZZ|1|A1|G|753
6GZZ|1|A1|A|754
6GZZ|1|A1|A|755
6GZZ|1|A1|G|756
*
6GZZ|1|A1|U|773
6GZZ|1|A1|G|774
6GZZ|1|A1|G|775
6GZZ|1|A1|A|776
6GZZ|1|A1|G|777
6GZZ|1|A1|G|778
6GZZ|1|A1|C|779
6GZZ|1|A1|C|780
6GZZ|1|A1|C|781
6GZZ|1|A1|G|782
6GZZ|1|A1|A|783
6GZZ|1|A1|A|784
6GZZ|1|A1|C|785
6GZZ|1|A1|C|786
*
6GZZ|1|A1|G|808
6GZZ|1|A1|G|809
6GZZ|1|A1|A|810
6GZZ|1|A1|U|811
6GZZ|1|A1|G|812

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2