J3_6GZZ_034

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGGUUC*GGUUAGGC*GUACC

Length

19 nucleotides

Bulged bases

6GZZ|1|A1|U|1389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|1357
6GZZ|1|A1|G|1358
6GZZ|1|A1|G|1359
6GZZ|1|A1|U|1360
6GZZ|1|A1|U|1361
6GZZ|1|A1|C|1362
*
6GZZ|1|A1|G|1386
6GZZ|1|A1|G|1387
6GZZ|1|A1|U|1388
6GZZ|1|A1|U|1389
6GZZ|1|A1|A|1390
6GZZ|1|A1|G|1391
6GZZ|1|A1|G|1392
6GZZ|1|A1|C|1393
*
6GZZ|1|A1|G|1649
6GZZ|1|A1|U|1650
6GZZ|1|A1|A|1651
6GZZ|1|A1|C|1652
6GZZ|1|A1|C|1653

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain S1

50S ribosomal protein L23

Chain c1

50S ribosomal protein L34