J3_6GZZ_043

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGGGGGACGC*GCC*GAAAAGCCUC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|1469
6GZZ|1|A2|G|1470
6GZZ|1|A2|G|1471
6GZZ|1|A2|G|1472
6GZZ|1|A2|G|1473
6GZZ|1|A2|G|1474
6GZZ|1|A2|A|1475
6GZZ|1|A2|C|1476
6GZZ|1|A2|G|1477
6GZZ|1|A2|C|1478
*
6GZZ|1|A2|G|1612
6GZZ|1|A2|C|1613
6GZZ|1|A2|C|1614
*
6GZZ|1|A2|G|1617
6GZZ|1|A2|A|1618
6GZZ|1|A2|A|1619
6GZZ|1|A2|A|1620
6GZZ|1|A2|A|1621
6GZZ|1|A2|G|1622
6GZZ|1|A2|C|1623
6GZZ|1|A2|C|1624
6GZZ|1|A2|U|1625
6GZZ|1|A2|C|1626

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain C2

50S ribosomal protein L2