J3_6GZZ_047
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGUAGAAGGGGGCCUGACUGCGAGGCC*GCCGAGCAGGG*CGGGC
- Length
- 43 nucleotides
- Bulged bases
- 6GZZ|1|A2|A|2347, 6GZZ|1|A2|G|2348, 6GZZ|1|A2|A|2350
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A2|G|2344
6GZZ|1|A2|G|2345
6GZZ|1|A2|U|2346
6GZZ|1|A2|A|2347
6GZZ|1|A2|G|2348
6GZZ|1|A2|A|2349
6GZZ|1|A2|A|2350
6GZZ|1|A2|G|2351
6GZZ|1|A2|G|2352
6GZZ|1|A2|G|2353
6GZZ|1|A2|G|2354
6GZZ|1|A2|G|2355
6GZZ|1|A2|C|2356
6GZZ|1|A2|C|2357
6GZZ|1|A2|U|2358
6GZZ|1|A2|G|2359
6GZZ|1|A2|A|2360
6GZZ|1|A2|C|2361
6GZZ|1|A2|U|2362
6GZZ|1|A2|G|2363
6GZZ|1|A2|C|2364
6GZZ|1|A2|G|2365
6GZZ|1|A2|A|2366
6GZZ|1|A2|G|2367
6GZZ|1|A2|G|2368
6GZZ|1|A2|C|2369
6GZZ|1|A2|C|2370
*
6GZZ|1|A2|G|2376
6GZZ|1|A2|C|2377
6GZZ|1|A2|C|2378
6GZZ|1|A2|G|2379
6GZZ|1|A2|A|2380
6GZZ|1|A2|G|2381
6GZZ|1|A2|C|2382
6GZZ|1|A2|A|2383
6GZZ|1|A2|G|2384
6GZZ|1|A2|G|2385
6GZZ|1|A2|G|2386
*
6GZZ|1|A2|C|2395
6GZZ|1|A2|G|2396
6GZZ|1|A2|G|2397
6GZZ|1|A2|G|2398
6GZZ|1|A2|C|2399
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain F2
- 50S ribosomal protein L5
- Chain N2
- 50S ribosomal protein L18
- Chain V2
- 50S ribosomal protein L27
- Chain b2
- 50S ribosomal protein L33
- Chain d2
- 50S ribosomal protein L35
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