J3_6GZZ_052
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGUCAGCUCGU*ACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGC*GAGGAAGGAGGGGACGACG
- Length
- 90 nucleotides
- Bulged bases
- 6GZZ|1|A3|C|1053, 6GZZ|1|A3|U|1104, 6GZZ|1|A3|U|1107, 6GZZ|1|A3|U|1118, 6GZZ|1|A3|C|1119, 6GZZ|1|A3|C|1123, 6GZZ|1|A3|A|1164
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A3|C|1045
6GZZ|1|A3|G|1046
6GZZ|1|A3|U|1047
6GZZ|1|A3|C|1048
6GZZ|1|A3|A|1049
6GZZ|1|A3|G|1050
6GZZ|1|A3|C|1051
6GZZ|1|A3|U|1052
6GZZ|1|A3|C|1053
6GZZ|1|A3|G|1054
6GZZ|1|A3|U|1055
*
6GZZ|1|A3|A|1084
6GZZ|1|A3|C|1085
6GZZ|1|A3|G|1086
6GZZ|1|A3|A|1087
6GZZ|1|A3|G|1088
6GZZ|1|A3|C|1089
6GZZ|1|A3|G|1090
6GZZ|1|A3|C|1091
6GZZ|1|A3|A|1092
6GZZ|1|A3|A|1093
6GZZ|1|A3|C|1094
6GZZ|1|A3|C|1095
6GZZ|1|A3|C|1096
6GZZ|1|A3|C|1097
6GZZ|1|A3|C|1098
6GZZ|1|A3|G|1099
6GZZ|1|A3|C|1100
6GZZ|1|A3|C|1101
6GZZ|1|A3|G|1102
6GZZ|1|A3|U|1103
6GZZ|1|A3|U|1104
6GZZ|1|A3|A|1105
6GZZ|1|A3|G|1106
6GZZ|1|A3|U|1107
6GZZ|1|A3|U|1108
6GZZ|1|A3|G|1109
6GZZ|1|A3|C|1110
6GZZ|1|A3|C|1111
6GZZ|1|A3|A|1112
6GZZ|1|A3|G|1113
6GZZ|1|A3|C|1114
6GZZ|1|A3|G|1115
6GZZ|1|A3|G|1116
6GZZ|1|A3|U|1117
6GZZ|1|A3|U|1118
6GZZ|1|A3|C|1119
6GZZ|1|A3|G|1120
6GZZ|1|A3|G|1121
6GZZ|1|A3|C|1122
6GZZ|1|A3|C|1123
6GZZ|1|A3|G|1124
6GZZ|1|A3|G|1125
6GZZ|1|A3|G|1126
6GZZ|1|A3|C|1127
6GZZ|1|A3|A|1128
6GZZ|1|A3|C|1129
6GZZ|1|A3|U|1130
6GZZ|1|A3|C|1131
6GZZ|1|A3|U|1132
6GZZ|1|A3|A|1133
6GZZ|1|A3|A|1134
6GZZ|1|A3|C|1135
6GZZ|1|A3|G|1136
6GZZ|1|A3|G|1137
6GZZ|1|A3|G|1138
6GZZ|1|A3|A|1139
6GZZ|1|A3|C|1140
6GZZ|1|A3|U|1141
6GZZ|1|A3|G|1142
6GZZ|1|A3|C|1143
*
6GZZ|1|A3|G|1156
6GZZ|1|A3|A|1157
6GZZ|1|A3|G|1158
6GZZ|1|A3|G|1159
6GZZ|1|A3|A|1160
6GZZ|1|A3|A|1161
6GZZ|1|A3|G|1162
6GZZ|1|A3|G|1163
6GZZ|1|A3|A|1164
6GZZ|1|A3|G|1165
6GZZ|1|A3|G|1166
6GZZ|1|A3|G|1167
6GZZ|1|A3|G|1168
6GZZ|1|A3|A|1169
6GZZ|1|A3|C|1170
6GZZ|1|A3|G|1171
6GZZ|1|A3|A|1172
6GZZ|1|A3|C|1173
6GZZ|1|A3|G|1174
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain B3
- 30S ribosomal protein S2
- Chain C3
- 30S ribosomal protein S3
- Chain E3
- 30S ribosomal protein S5
- Chain G3
- 30S ribosomal protein S7
- Chain I3
- 30S ribosomal protein S9
- Chain J3
- 30S ribosomal protein S10
- Chain N3
- 30S ribosomal protein S14 type Z
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