J3_6H58_069
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 6H58|1|aa|U|1212, 6H58|1|aa|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6H58_069 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.1235
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6H58|1|aa|C|990
6H58|1|aa|U|991
6H58|1|aa|U|992
6H58|1|aa|G|993
6H58|1|aa|A|994
6H58|1|aa|C|995
6H58|1|aa|A|996
6H58|1|aa|U|997
*
6H58|1|aa|A|1044
6H58|1|aa|C|1045
6H58|1|aa|A|1046
6H58|1|aa|G|1047
*
6H58|1|aa|C|1210
6H58|1|aa|U|1211
6H58|1|aa|U|1212
6H58|1|aa|A|1213
6H58|1|aa|C|1214
6H58|1|aa|G|1215
Current chains
- Chain aa
- 16S ribosomal RNA
Nearby chains
- Chain nn
- 30S ribosomal protein S14
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