J3_6HA1_023

3D structure

PDB id

6HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAAU*ACGUCC*GGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HA1|1|a|G|1013
6HA1|1|a|A|1014
6HA1|1|a|C|1015
6HA1|1|a|A|1016
6HA1|1|a|A|1017
6HA1|1|a|U|1018
*
6HA1|1|a|A|1031
6HA1|1|a|C|1032
6HA1|1|a|G|1033
6HA1|1|a|U|1034
6HA1|1|a|C|1035
6HA1|1|a|C|1036
*
6HA1|1|a|G|1045
6HA1|1|a|G|1046
6HA1|1|a|C|1047

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14