J3_6HA1_037
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUAUG
- Length
- 18 nucleotides
- Bulged bases
- 6HA1|1|a|U|1223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6HA1_037 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.1325
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HA1|1|a|C|1000
6HA1|1|a|U|1001
6HA1|1|a|U|1002
6HA1|1|a|G|1003
6HA1|1|a|A|1004
6HA1|1|a|C|1005
6HA1|1|a|A|1006
6HA1|1|a|U|1007
*
6HA1|1|a|A|1054
6HA1|1|a|C|1055
6HA1|1|a|A|1056
6HA1|1|a|G|1057
*
6HA1|1|a|C|1219
6HA1|1|a|U|1220
6HA1|1|a|U|1221
6HA1|1|a|A|1222
6HA1|1|a|U|1223
6HA1|1|a|G|1224
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
Coloring options: