J3_6HCJ_027
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCUCUCCCACCC*GGGGGGC*GGGC
- Length
- 23 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|G|1098
6HCJ|1|51|C|1099
6HCJ|1|51|U|1100
6HCJ|1|51|C|1101
6HCJ|1|51|U|1102
6HCJ|1|51|C|1103
6HCJ|1|51|C|1104
6HCJ|1|51|C|1105
6HCJ|1|51|A|1106
6HCJ|1|51|C|1107
6HCJ|1|51|C|1108
6HCJ|1|51|C|1109
*
6HCJ|1|51|G|1161
6HCJ|1|51|G|1162
6HCJ|1|51|G|1163
6HCJ|1|51|G|1164
6HCJ|1|51|G|1165
6HCJ|1|51|G|1166
6HCJ|1|51|C|1167
*
6HCJ|1|51|G|1194
6HCJ|1|51|G|1195
6HCJ|1|51|G|1196
6HCJ|1|51|C|1197
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain D3
- 60S ribosomal protein L5
- Chain S3
- eL20
Coloring options: