J3_6HCJ_031
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUC*GGAGUCGGGUUCAGAUCCCCGAAUC*GGC
- Length
- 31 nucleotides
- Bulged bases
- 6HCJ|1|51|U|2530, 6HCJ|1|51|C|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|G|2443
6HCJ|1|51|U|2444
6HCJ|1|51|C|2445
*
6HCJ|1|51|G|2515
6HCJ|1|51|G|2516
6HCJ|1|51|A|2517
6HCJ|1|51|G|2518
6HCJ|1|51|U|2519
6HCJ|1|51|C|2520
6HCJ|1|51|G|2521
6HCJ|1|51|G|2522
6HCJ|1|51|G|2523
6HCJ|1|51|U|2524
6HCJ|1|51|U|2525
6HCJ|1|51|C|2526
6HCJ|1|51|A|2527
6HCJ|1|51|G|2528
6HCJ|1|51|A|2529
6HCJ|1|51|U|2530
6HCJ|1|51|C|2531
6HCJ|1|51|C|2532
6HCJ|1|51|C|2533
6HCJ|1|51|C|2534
6HCJ|1|51|G|2535
6HCJ|1|51|A|2536
6HCJ|1|51|A|2537
6HCJ|1|51|U|2538
6HCJ|1|51|C|2539
*
6HCJ|1|51|G|2777
6HCJ|1|51|G|2778
6HCJ|1|51|C|2779
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain R3
- eL19
- Chain X3
- uL23
- Chain g3
- eL34
- Chain k3
- eL38
- Chain l3
- eL39
Coloring options: