J3_6HCM_008

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

ACCAUUCG*CCUGCUUCU*AAGGGU

Length

23 nucleotides

Bulged bases

6HCM|1|52|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|A|4968
6HCM|1|52|C|4969
6HCM|1|52|C|4970
6HCM|1|52|A|4971
6HCM|1|52|U|4972
6HCM|1|52|U|4973
6HCM|1|52|C|4974
6HCM|1|52|G|4975
*
6HCM|1|52|C|4983
6HCM|1|52|C|4984
6HCM|1|52|U|4985
6HCM|1|52|G|4986
6HCM|1|52|C|4987
6HCM|1|52|U|4988
6HCM|1|52|U|4989
6HCM|1|52|C|4990
6HCM|1|52|U|4991
*
6HCM|1|52|A|5060
6HCM|1|52|A|5061
6HCM|1|52|G|5062
6HCM|1|52|G|5063
6HCM|1|52|G|5064
6HCM|1|52|U|5065

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain P3

uL22

Chain d3

eL31