J3_6HCM_033
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CUCAG*CGUGGAG*CAAAAG
- Length
- 18 nucleotides
- Bulged bases
- 6HCM|1|52|A|4280, 6HCM|1|52|A|4282
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|52|C|4241
6HCM|1|52|U|4242
6HCM|1|52|C|4243
6HCM|1|52|A|4244
6HCM|1|52|G|4245
*
6HCM|1|52|C|4263
6HCM|1|52|G|4264
6HCM|1|52|U|4265
6HCM|1|52|G|4266
6HCM|1|52|G|4267
6HCM|1|52|A|4268
6HCM|1|52|G|4269
*
6HCM|1|52|C|4278
6HCM|1|52|A|4279
6HCM|1|52|A|4280
6HCM|1|52|A|4281
6HCM|1|52|A|4282
6HCM|1|52|G|4283
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain 23
- Transfer RNA; tRNA
- Chain 72
- 5S ribosomal RNA; 5S rRNA
- Chain D3
- 60S ribosomal protein L5
- Chain J3
- Ribosomal protein L11
- Chain T3
- eL21
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