J3_6HCM_057
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- AC*GAGAAUUAA*UCGACACU
- Length
- 19 nucleotides
- Bulged bases
- 6HCM|1|82|A|62, 6HCM|1|82|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCM|1|82|A|44
6HCM|1|82|C|45
*
6HCM|1|82|G|58
6HCM|1|82|A|59
6HCM|1|82|G|60
6HCM|1|82|A|61
6HCM|1|82|A|62
6HCM|1|82|U|63
6HCM|1|82|U|64
6HCM|1|82|A|65
6HCM|1|82|A|66
*
6HCM|1|82|U|92
6HCM|1|82|C|93
6HCM|1|82|G|94
6HCM|1|82|A|95
6HCM|1|82|C|96
6HCM|1|82|A|97
6HCM|1|82|C|98
6HCM|1|82|U|99
Current chains
- Chain 82
- 5.8S ribosomal RNA
Nearby chains
- Chain 52
- Large subunit ribosomal RNA; LSU rRNA
- Chain X3
- uL23
- Chain Y3
- Ribosomal protein L26
- Chain h3
- uL29
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
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