J3_6HCQ_008
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GACUGUUUAAUUAAAACAAAGC*GUGAUUU*GAUGAAC
- Length
- 36 nucleotides
- Bulged bases
- 6HCQ|1|51|A|3642, 6HCQ|1|51|A|3643, 6HCQ|1|51|U|3644, 6HCQ|1|51|A|3648
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|G|3634
6HCQ|1|51|A|3635
6HCQ|1|51|C|3636
6HCQ|1|51|U|3637
6HCQ|1|51|G|3638
6HCQ|1|51|U|3639
6HCQ|1|51|U|3640
6HCQ|1|51|U|3641
6HCQ|1|51|A|3642
6HCQ|1|51|A|3643
6HCQ|1|51|U|3644
6HCQ|1|51|U|3645
6HCQ|1|51|A|3646
6HCQ|1|51|A|3647
6HCQ|1|51|A|3648
6HCQ|1|51|A|3649
6HCQ|1|51|C|3650
6HCQ|1|51|A|3651
6HCQ|1|51|A|3652
6HCQ|1|51|A|3653
6HCQ|1|51|G|3654
6HCQ|1|51|C|3655
*
6HCQ|1|51|G|3689
6HCQ|1|51|U|3690
6HCQ|1|51|G|3691
6HCQ|1|51|A|3692
6HCQ|1|51|U|3693
6HCQ|1|51|U|3694
6HCQ|1|51|U|3695
*
6HCQ|1|51|G|3820
6HCQ|1|51|A|3821
6HCQ|1|51|U|3822
6HCQ|1|51|G|3823
6HCQ|1|51|A|3824
6HCQ|1|51|A|3825
6HCQ|1|51|C|3826
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A3
- Ribosomal protein L8
- Chain j3
- Ribosomal protein L37
- Chain n3
- eL41
- Chain p3
- eL43
Coloring options: