J3_6HCQ_011

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CUAUC*GUU*ACUAAUAG

Length

16 nucleotides

Bulged bases

6HCQ|1|51|A|4464

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|C|4462
6HCQ|1|51|U|4463
6HCQ|1|51|A|4464
6HCQ|1|51|U|4465
6HCQ|1|51|C|4466
*
6HCQ|1|51|G|4491
6HCQ|1|51|U|4492
6HCQ|1|51|U|4493
*
6HCQ|1|51|A|4507
6HCQ|1|51|C|4508
6HCQ|1|51|U|4509
6HCQ|1|51|A|4510
6HCQ|1|51|A|4511
6HCQ|1|51|U|4512
6HCQ|1|51|A|4513
6HCQ|1|51|G|4514

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

uL13

Chain V3

Ribosomal protein L23