J3_6HCQ_028
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GUGAACUA*UAGGG*UAAUCGAAC
- Length
- 22 nucleotides
- Bulged bases
- 6HCQ|1|51|A|1534, 6HCQ|1|51|A|1638, 6HCQ|1|51|U|1639, 6HCQ|1|51|G|1641
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|51|G|1530
6HCQ|1|51|U|1531
6HCQ|1|51|G|1532
6HCQ|1|51|A|1533
6HCQ|1|51|A|1534
6HCQ|1|51|C|1535
6HCQ|1|51|U|1536
6HCQ|1|51|A|1537
*
6HCQ|1|51|U|1622
6HCQ|1|51|A|1623
6HCQ|1|51|G|1624
6HCQ|1|51|G|1625
6HCQ|1|51|G|1626
*
6HCQ|1|51|U|1636
6HCQ|1|51|A|1637
6HCQ|1|51|A|1638
6HCQ|1|51|U|1639
6HCQ|1|51|C|1640
6HCQ|1|51|G|1641
6HCQ|1|51|A|1642
6HCQ|1|51|A|1643
6HCQ|1|51|C|1644
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A3
- Ribosomal protein L8
- Chain C3
- uL4
- Chain N3
- Ribosomal protein L15
- Chain P3
- uL22
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
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