J3_6HCQ_038
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- UUGGA*UUAAGAGG*UCAUUAA
- Length
- 20 nucleotides
- Bulged bases
- 6HCQ|1|A2|G|921
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCQ|1|A2|U|681
6HCQ|1|A2|U|682
6HCQ|1|A2|G|683
6HCQ|1|A2|G|684
6HCQ|1|A2|A|685
*
6HCQ|1|A2|U|917
6HCQ|1|A2|U|918
6HCQ|1|A2|A|919
6HCQ|1|A2|A|920
6HCQ|1|A2|G|921
6HCQ|1|A2|A|922
6HCQ|1|A2|G|923
6HCQ|1|A2|G|924
*
6HCQ|1|A2|U|1018
6HCQ|1|A2|C|1019
6HCQ|1|A2|A|1020
6HCQ|1|A2|U|1021
6HCQ|1|A2|U|1022
6HCQ|1|A2|A|1023
6HCQ|1|A2|A|1024
Current chains
- Chain A2
- 18S ribosomal RNA
Nearby chains
- Chain I2
- 40S ribosomal protein S7
- Chain M2
- Ribosomal protein S11
- Chain O2
- uS15
- Chain X2
- Ribosomal protein S15a
- Chain Y2
- uS12
- Chain c2
- 40S ribosomal protein S27
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