J3_6HCQ_043

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

UCUCCCACC*GGGGGC*GG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCQ|1|51|U|1100
6HCQ|1|51|C|1101
6HCQ|1|51|U|1102
6HCQ|1|51|C|1103
6HCQ|1|51|C|1104
6HCQ|1|51|C|1105
6HCQ|1|51|A|1106
6HCQ|1|51|C|1107
6HCQ|1|51|C|1108
*
6HCQ|1|51|G|1162
6HCQ|1|51|G|1163
6HCQ|1|51|G|1164
6HCQ|1|51|G|1165
6HCQ|1|51|G|1166
6HCQ|1|51|C|1167
*
6HCQ|1|51|G|1194
6HCQ|1|51|G|1195

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain D3

60S ribosomal protein L5