J3_6HTQ_005

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GGAUGUUGG*CACCAUUUAAAG*CAC

Length

24 nucleotides

Bulged bases

6HTQ|1|A|U|1107, 6HTQ|1|A|C|1124

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|A|G|1101
6HTQ|1|A|G|1102
6HTQ|1|A|A|1103
6HTQ|1|A|U|1104
6HTQ|1|A|G|1105
6HTQ|1|A|U|1106
6HTQ|1|A|U|1107
6HTQ|1|A|G|1108
6HTQ|1|A|G|1109
*
6HTQ|1|A|C|1122
6HTQ|1|A|A|1123
6HTQ|1|A|C|1124
6HTQ|1|A|C|1125
6HTQ|1|A|A|1126
6HTQ|1|A|U|1127
6HTQ|1|A|U|1128
6HTQ|1|A|U|1129
6HTQ|1|A|A|1130
6HTQ|1|A|A|1131
6HTQ|1|A|A|1132
6HTQ|1|A|G|1133
*
6HTQ|1|A|C|1148
6HTQ|1|A|A|1149
6HTQ|1|A|C|1150

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L36

Chain u

Transfer RNA; tRNA

Chain x

GTP pyrophosphokinase