3D structure

PDB id
6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.5 Å

Loop

Sequence
UCC*GUUGAUA*UAAUCGA
Length
17 nucleotides
Bulged bases
6HTQ|1|A|U|2858, 6HTQ|1|A|A|2860
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HTQ|1|A|U|2838
6HTQ|1|A|C|2839
6HTQ|1|A|C|2840
*
6HTQ|1|A|G|2856
6HTQ|1|A|U|2857
6HTQ|1|A|U|2858
6HTQ|1|A|G|2859
6HTQ|1|A|A|2860
6HTQ|1|A|U|2861
6HTQ|1|A|A|2862
*
6HTQ|1|A|U|2906
6HTQ|1|A|A|2907
6HTQ|1|A|A|2908
6HTQ|1|A|U|2909
6HTQ|1|A|C|2910
6HTQ|1|A|G|2911
6HTQ|1|A|A|2912

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 1
50S ribosomal protein L32
Chain D
50S ribosomal protein L3
Chain N
50S ribosomal protein L17
Chain S
50S ribosomal protein L22

Coloring options:

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